Publications

[First author] D Jeon, Y Choi, C Kim (2026). A near-gapless wild carrot genome reveals TE-associated structural variation and multilayered evolution of carotenoid pathway genes.

[First author] D Jeon, C Kim (2026). OrganelleCleaner: identification and removal of organellar contigs in genome assemblies using graph topology, sequence features, and homology evidence.

[First author] D Jeon, K Shim (2026). Refining QTL-seq resolution by re-analysis of significant ΔSNP-index signals using high-resolution sliding windows.

[Co-author] S Choi, D Jeon, S Lee, C Kim (2026). Gene reduction and functional divergence shaping sclareol biosynthesis in Salvia sclarea.

[Co-author] S Lee, D Jeon, S Choi, C Kim (2026). Genome size reduction in the tetraploid grass Zoysia japonica: integrating comparative genomics approaches for the Chloridoideae subfamily.

[Co-author] S Lee, D Jeon, S Choi, C Kim (2026). Insights into glyphosate resistance mechanisms in Eleusine indica: EPSPS copy number and expression dynamics.

[Co-first author] S Kim*, D Jeon*, C Kim (2026). Integrative phenotypic and transcriptomic network analysis reveals ion homeostasis-associated modules underlying saline-alkaline tolerance in sorghum. BMC Plant Biology (In press).

[Co-author] Y-J Sung, D Jeon, C Kim (2026). Chromosome-scale genome assembly and annotation of anise hyssop (Agastache foeniculum). Scientific Data (In press).

[Co-first author] K Shim*, D Jeon*, Y Jeon, C Adeva, H Lee, J Kang, S Park, S Ahn, I Park (2026). Genetic dissection and transcriptomic analysis of a novel high-tillering phenotype in rice derived from weedy rice (Hapcheonaengmi3) and Tongil-type rice (Milyang23). The Plant Genome.

[First author] D Jeon, S Lee, S Choi, AH Paterson, C Kim (2026). A chromosome-scale assembly of the wasabi genome reveals insights into subgenome evolution and glucosinolate biosynthesis. BMC Plant Biology.

[First author] D Jeon, C Choi, J Park, C Kang, J Kim, C Kim (2026). Genomic selection for multi-trait crop improvement in wheat (Triticum aestivum L.): a practical modeling approach. BMC Plant Biology.

[Co-first author] D Jeon*, Y Kang*, Y Lim, K Lee, KS Cheon, D Shim, C Kim (2025). The first application of genomic selection for tree morphological traits in Pinus koraiensis using markers identified through a genome-wide association study. Forestry: An International Journal of Forest Research.

[First author] D Jeon, Y Sung, C Kim (2024). High-quality chromosomal-level genome assembly of the wasabi (Eutrema japonicum) Magic cultivar. Scientific Data.

[First author] D Jeon, C Kim (2024). Polyploids of Brassicaceae: genomic insights and assembly strategies. Plants.

[First author] D Jeon, JB Kim, BC Kang, C Kim (2023). Deciphering the genetic mechanisms of salt tolerance in Sorghum bicolor L.: key genes and SNP associations from comparative transcriptomic analyses. Plants.

[Co-author] S Choi, JS Seo, JW Ahn, SJ Kwon, D Jeon, C Kim (2023). Alteration of gene expression profiles in the mutant line of Sorghum bicolor. Journal of Crop Science and Biotechnology.

[First author] D Jeon, Y Kang, S Lee, S Choi, Y Sung, TH Lee, C Kim (2023). Digitalizing breeding in plants: a new trend of next-generation breeding based on genomic prediction. Frontiers in Plant Science.

[First author] D Jeon, S Lee, S Choi, Y Kang, C Kim (2022). Identification of SNPs and candidate genes associated with salt stress in two Korean sorghum cultivars and understanding selection pressures in the breeding process. Agronomy.

[Co-author] S Lee, D Jeon, S Choi, Y Kang, S Seo, S Kwon, J Lyu, J Ahn, J Seo, C Kim (2022). Expression profile of sorghum genes and cis-regulatory elements under salt-stress conditions. Plants.

[Co-first author] D Jeon*, Y Lim*, Y Kang, C Park, D Lee, J Park, U Choi, K Kim, C Kim (2022). Transcriptomic analysis of Triticum aestivum under salt stress reveals change of gene expression. The Korean Journal of Crop Science.

[Co-author] S Choi, Y Kang, S Lee, D Jeon, S Seo, TH Lee, C Kim (2022). Physio-chemical and co-expression network analysis associated with salt stress in sorghum. Frontiers in Bioscience-Landmark.

[Co-author] K Kim, Y Kang, SJ Lee, SH Choi, D Jeon, MY Park, S Park, YP Lim, C Kim (2020). Quantitative trait loci (QTLs) associated with microspore culture in Raphanus sativus L. (radish). Genes.

[First author] D Jeon, S Lee, S Choi, S Seo, C Kim (2020). Effect of salt stress on the anthocyanin content and associated genes in Sorghum bicolor L. Korean Journal of Agricultural Science.

[Co-first author] S Lee*, S Choi*, D Jeon*, Y Kang, C Kim (2020). Evolutionary impact of whole-genome duplication in the Poaceae family. Journal of Crop Science and Biotechnology.